PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_66348.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 337aa    MW: 37691.2 Da    PI: 5.7209
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_66348.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.23.9e-50381692128
           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                    pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+  
  MLOC_66348.1  38 LPGYRFHPTDEELVTFYLRRKVARKSLRI-EVIREIDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSAaa 133
                   69***************************.99***************445556889**************************************988 PP

           NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +g  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  MLOC_66348.1 134 graSGVSIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 169
                   7777777***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100554.30937198IPR003441NAC domain
SuperFamilySSF1019412.62E-5537197IPR003441NAC domain
PfamPF023659.9E-2539169IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MVAKADMTVM EMEKATSDGE VVLGGAGDDD DEEEDVVLPG YRFHPTDEEL VTFYLRRKVA  60
RKSLRIEVIR EIDIYKHDPW DLPKASTVGG EKEWYFFCLR GRKYRNSIRP NRVTGSGFWK  120
ATGIDRPIYS AAAGRASGVS IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP PAAAAAATNS  180
SPSMQEAEVW TICRIFRRTI TYRKQQQQPW RPAPAVSAAD SSSNTGSFES SEVSDEYINC  240
LQAPAAAAPC IPEQHQYVSQ TGTVDSGNYF YMDTMHNQQQ VQGQWNAPPA APVPEHKPQS  300
QLSAANDFYK VEGYLEEIAR MMEVTDPAGF YDCRSYA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-48232041174Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3747280.0AK374728.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3074N05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004981565.11e-152PREDICTED: transcription factor JUNGBRUNNEN 1
SwissprotQ9SK554e-90NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLM0Y7290.0M0Y729_HORVD; Uncharacterized protein
STRINGMLOC_66348.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119138129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-80NAC domain containing protein 42